Module Utils

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Functions

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convert_genepop_to_fdist(gp_rec, report_pops=None)
Converts a GenePop record to a FDist one.

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_convert_genepop_to_fdist(gp_rec)
Converts a standard GenePop record to a FDist one.

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_convert_genepop_to_fdist_big(gp_rec, report_pops=None)
Converts a big GenePop record to a FDist one.

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_convert_genepop_to_fdist_big_old(gp_rec, report_loci=None)
Converts a big GenePop record to a FDist one.

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approximate_fst(desired_fst, simulated_fst, parameter_fst, max_run_fst=1, min_run_fst=0, limit=0.005)
Calculates the next Fst attempt in order to approximate a desired Fst.

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Variables

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__package__ = 'Bio.PopGen.FDist'

Function Details

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convert_genepop_to_fdist(gp_rec, report_pops=None)

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Converts a GenePop record to a FDist one.

Parameters: gp_rec - Genepop Record (either standard or big)

Returns: FDist record.

_convert_genepop_to_fdist(gp_rec)

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Converts a standard GenePop record to a FDist one.

Parameters: gp_rec - Genepop Record (Standard)

Returns: FDist record.

_convert_genepop_to_fdist_big(gp_rec, report_pops=None)

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Converts a big GenePop record to a FDist one.

Parameters: gp_rec - Genepop Record (Big)

Returns: FDist record.

_convert_genepop_to_fdist_big_old(gp_rec, report_loci=None)

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Converts a big GenePop record to a FDist one.

Parameters: gp_rec - Genepop Record (Big)

Returns: FDist record.