Package Bio :: Package Phylo :: Module PhyloXML :: Class Reference

Class Reference

          object --+        
                   |        
BaseTree.TreeElement --+    
                       |    
            PhyloElement --+
                           |
                          Reference

Literature reference for a clade.

It is recommended to use the 'doi' attribute instead of the free text 'desc' element whenever possible.

Instance Methods

[hide private]

__init__(self, doi=None, desc=None)
x.__init__(...) initializes x; see x.__class__.__doc__ for signature

source code

Inherited from BaseTree.TreeElement: __repr__, __str__

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __setattr__, __sizeof__, __subclasshook__

Class Variables

[hide private]

re_doi = re.compile(r'[a-zA-Z0-9_\.]+/[a-zA-Z0-9_\.]+')

Properties

[hide private]

Inherited from object: __class__

Method Details

[hide private]

init(self, doi=None, desc=None)
(Constructor)

source code

x.__init__(...) initializes x; see x.__class__.__doc__ for signature

Overrides: object.__init__: (inherited documentation)

Class Reference

__init__(self, doi=None, desc=None) (Constructor)

init(self, doi=None, desc=None)
(Constructor)