Package Bio :: Package Phylo :: Module PhyloXML :: Class Distribution

Class Distribution

          object --+        
                   |        
BaseTree.TreeElement --+    
                       |    
            PhyloElement --+
                           |
                          Distribution

Geographic distribution of the items of a clade (species, sequences).

Intended for phylogeographic applications.

The location can be described either by free text in the 'desc' element and/or by the coordinates of one or more 'Points' (similar to the 'Point' element in Google's KML format) or by 'Polygons'.

Instance Methods

[hide private]

__init__(self, desc=None, points=None, polygons=None)
x.__init__(...) initializes x; see x.__class__.__doc__ for signature

source code

Inherited from BaseTree.TreeElement: __repr__, __str__

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __setattr__, __sizeof__, __subclasshook__

Properties

[hide private]

Inherited from object: __class__

Method Details

[hide private]

init(self, desc=None, points=None, polygons=None)
(Constructor)

source code

x.__init__(...) initializes x; see x.__class__.__doc__ for signature

Overrides: object.__init__: (inherited documentation)

Class Distribution

__init__(self, desc=None, points=None, polygons=None) (Constructor)

init(self, desc=None, points=None, polygons=None)
(Constructor)