Package Bio :: Package SeqIO :: Module _index :: Class FastqSangerDict

Class FastqSangerDict

     object --+            
              |            
           dict --+        
                  |        
_IndexedSeqFileDict --+    
                      |    
      _FastqSeqFileDict --+
                          |
                         FastqSangerDict

Indexed dictionary like access to a standard Sanger FASTQ file.

Instance Methods

[hide private]

new empty dictionary

__init__(self, filename, alphabet, key_function)
x.__init__(...) initializes x; see x.__class__.__doc__ for signature

source code

Inherited from _IndexedSeqFileDict: __getitem__, __repr__, __setitem__, __str__, clear, copy, fromkeys, get, items, iteritems, pop, popitem, update, values

Inherited from _IndexedSeqFileDict (private): _record_key

Inherited from dict: __cmp__, __contains__, __delitem__, __eq__, __ge__, __getattribute__, __gt__, __iter__, __le__, __len__, __lt__, __ne__, __new__, __sizeof__, has_key, iterkeys, itervalues, keys, setdefault

Inherited from object: __delattr__, __format__, __reduce__, __reduce_ex__, __setattr__, __subclasshook__

Class Variables

[hide private]

Inherited from dict: __hash__

Properties

[hide private]

Inherited from object: __class__

Method Details

[hide private]

init(self, filename, alphabet, key_function)
(Constructor)

source code

x.__init__(...) initializes x; see x.__class__.__doc__ for signature

Returns: new empty dictionary
Overrides: object.__init__: (inherited documentation)

Class FastqSangerDict

__init__(self, filename, alphabet, key_function) (Constructor)

init(self, filename, alphabet, key_function)
(Constructor)