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Code to interact with and run various EMBOSS programs.
These classes follow the AbstractCommandline interfaces for running programs.
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_EmbossMinimalCommandLine Base Commandline object for EMBOSS wrappers (PRIVATE). |
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_EmbossCommandLine Base Commandline object for EMBOSS wrappers (PRIVATE). |
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Primer3Commandline Commandline object for the Primer3 interface from EMBOSS. |
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PrimerSearchCommandline Commandline object for the primersearch program from EMBOSS. |
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EProtDistCommandline Commandline object for the eprotdist program from EMBOSS (OBSOLETE). |
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ENeighborCommandline Commandline object for the eneighbor program from EMBOSS (OBSOLETE). |
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EProtParsCommandline Commandline object for the eprotpars program from EMBOSS (OBSOLETE). |
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EConsenseCommandline Commandline object for the econsense program from EMBOSS (OBSOLETE). |
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ESeqBootCommandline Commandline object for the eseqboot program from EMBOSS (OBSOLETE). |
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FDNADistCommandline Commandline object for the fdnadist program from EMBOSS. |
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FTreeDistCommandline Commandline object for the ftreedist program from EMBOSS. |
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FNeighborCommandline Commandline object for the fneighbor program from EMBOSS. |
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FSeqBootCommandline Commandline object for the fseqboot program from EMBOSS. |
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FDNAParsCommandline Commandline object for the fdnapars program from EMBOSS. |
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FProtParsCommandline Commandline object for the fdnapars program from EMBOSS. |
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FProtDistCommandline Commandline object for the fprotdist program from EMBOSS. |
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FConsenseCommandline Commandline object for the fconsense program from EMBOSS. |
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WaterCommandline Commandline object for the water program from EMBOSS. |
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NeedleCommandline Commandline object for the needle program from EMBOSS. |
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FuzznucCommandline Commandline object for the fuzznuc program from EMBOSS. |
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Est2GenomeCommandline Commandline object for the est2genome program from EMBOSS. |
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ETandemCommandline Commandline object for the etandem program from EMBOSS. |
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EInvertedCommandline Commandline object for the einverted program from EMBOSS. |
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PalindromeCommandline Commandline object for the palindrome program from EMBOSS. |
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TranalignCommandline Commandline object for the tranalign program from EMBOSS. |
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DiffseqCommandline Commandline object for the diffseq program from EMBOSS. |
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IepCommandline Commandline for EMBOSS iep: calculated isoelectric point and charge. |
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SeqretCommandline Commandline object for the seqret program from EMBOSS. |
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SeqmatchallCommandline Commandline object for the seqmatchall program from EMBOSS |
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__package__ = |
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| Generated by Epydoc 3.0.1 on Wed Dec 16 11:25:16 2009 | http://epydoc.sourceforge.net |