Package Bio :: Package Blast :: Module NCBIStandalone :: Class _HSPConsumer

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Class _HSPConsumer

Known Subclasses:

Instance Methods

start_hsp(self)

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score(self, line)

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identities(self, line)

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strand(self, line)

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frame(self, line)

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query(self, line)

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align(self, line)

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sbjct(self, line)

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end_hsp(self)

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Class Variables

_query_re = re.compile(r'Query(:?) \s*(\d+)\s*(.+) (\d+)')

_sbjct_re = re.compile(r'Sbjct(:?) \s*(\d+)\s*(.+) (\d+)')