Package Bio :: Package Blast :: Module Applications :: Class RpsBlastCommandline

Class RpsBlastCommandline

                     object --+        
                              |        
Application.AbstractCommandline --+    
                                  |    
                  _BlastCommandLine --+
                                      |
                                     RpsBlastCommandline

Create a commandline for the rpsblast program from NCBI.

Instance Methods

[hide private]

__init__(self, cmd='rpsblast', **kwargs)
Create a new instance of a command line wrapper object. source code

Inherited from Application.AbstractCommandline: __repr__, __str__, set_parameter

Inherited from Application.AbstractCommandline (private): _check_value, _clear_parameter, _get_parameter, _validate

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __setattr__, __sizeof__, __subclasshook__

Properties

[hide private]

Inherited from object: __class__

Method Details

[hide private]

init(self, cmd=`'rpsblast'`, **kwargs)
(Constructor)

source code

Create a new instance of a command line wrapper object.

Overrides: object.__init__: (inherited documentation)

Class RpsBlastCommandline

__init__(self, cmd='rpsblast', **kwargs) (Constructor)

init(self, cmd=`'rpsblast'`, **kwargs)
(Constructor)